Last updated on 2026-03-09 17:50:01 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.9.8 | 19.60 | 70.05 | 89.65 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.9.8 | 15.31 | 44.67 | 59.98 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.9.8 | 35.00 | 93.87 | 128.87 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.9.8 | 41.00 | 97.32 | 138.32 | OK | |
| r-devel-macos-arm64 | 0.9.8 | 5.00 | 16.00 | 21.00 | OK | |
| r-devel-windows-x86_64 | 0.9.8 | 26.00 | 90.00 | 116.00 | OK | |
| r-patched-linux-x86_64 | 0.9.8 | 19.24 | 60.61 | 79.85 | OK | |
| r-release-linux-x86_64 | 0.9.8 | 16.09 | 60.38 | 76.47 | OK | |
| r-release-macos-arm64 | 0.9.8 | OK | ||||
| r-release-macos-x86_64 | 0.9.8 | 12.00 | 54.00 | 66.00 | OK | |
| r-release-windows-x86_64 | 0.9.8 | 28.00 | 88.00 | 116.00 | OK | |
| r-oldrel-macos-arm64 | 0.9.8 | OK | ||||
| r-oldrel-macos-x86_64 | 0.9.8 | 17.00 | 37.00 | 54.00 | OK | |
| r-oldrel-windows-x86_64 | 0.9.8 | 30.00 | 116.00 | 146.00 | OK |
Version: 0.9.8
Check: tests
Result: ERROR
Running ‘testthat.R’ [52s/60s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
>
> # required packages
> library(testthat)
> library(fst)
>
> # run tests
> test_check("fst")
OMP: Warning #96: Cannot form a team with 24 threads, using 2 instead.
OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).
*** caught segfault ***
address 0x1f1c00001f2b, cause 'memory not mapped'
*** recursive gc invocation
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Traceback:
1: make.unique(as.character(rows))
2: `[.data.frame`(difftable, uneq, )
3: difftable[uneq, ]
4: paste(difftable[uneq, ][1:min(25, sum(uneq, na.rm = TRUE)), 1], collapse = ",")
5: paste("args: col:", col, "| from:", from, "| to:", to, "| setColumns:", sel_columns, "| compress:", compress, "| tot_length", tot_length, " cols sub_dt:", ncol(sub_dt), ", rows sub_dt:", nrow(sub_dt), "cols data:", ncol(data), ", rows data:", nrow(data), "head sub_dt:", paste(sub_dt[1:10, 1], collapse = ","), "head data:", paste(data[1:10, 1], collapse = ","), "unequals:", sum(uneq), "uneq rows sub_dt1", paste(difftable[uneq, ][1:min(25, sum(uneq, na.rm = TRUE)), 1], collapse = ","), "uneq rows sub_dt2", paste(difftable[uneq, ][1:min(25, sum(uneq, na.rm = TRUE)), 2], collapse = ","), "uneq rows sub_dt3", paste(difftable[uneq, ][1:min(25, sum(uneq, na.rm = TRUE)), 3], collapse = ","))
6: test_write_read(col, 1L + block_start * block_size, last_row, NULL, compression)
7: blocktests(type, 0, 1, 80L)
8: blocktestsingletype("Ylog")
9: eval(code, test_env)
10: eval(code, test_env)
11: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
12: doTryCatch(return(expr), name, parentenv, handler)
13: tryCatchOne(expr, names, parentenv, handlers[[1L]])
14: tryCatchList(expr, classes, parentenv, handlers)
15: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
16: doWithOneRestart(return(expr), restart)
17: withOneRestart(expr, restarts[[1L]])
18: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
19: test_code(code, parent.frame())
20: test_that("Logical column block tests", { blocktestsingletype("Ylog")})
21: eval(code, test_env)
22: eval(code, test_env)
23: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
24: doTryCatch(return(expr), name, parentenv, handler)
25: tryCatchOne(expr, names, parentenv, handlers[[1L]])
26: tryCatchList(expr, classes, parentenv, handlers)
27: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
28: doWithOneRestart(return(expr), restart)
29: withOneRestart(expr, restarts[[1L]])
30: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
31: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
32: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
33: FUN(X[[i]], ...)
34: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
35: doTryCatch(return(expr), name, parentenv, handler)
36: tryCatchOne(expr, names, parentenv, handlers[[1L]])
37: tryCatchList(expr, classes, parentenv, handlers)
38: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
39: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
40: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
41: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
42: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
43: test_check("fst")
An irrecoverable exception occurred. R is aborting now ...
Flavor: r-devel-linux-x86_64-fedora-clang