Generating Cluster Masks for Single-Cell Dimensional Reduction Plots


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Documentation for package ‘mascarade’ version 0.3.1

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exampleMascarade Example data with UMAP points from PBMC3K dataset.
fancyMask Generate ggplot2 layers for a labeled cluster mask
generateMask Generate mask for clusters on 2D dimensional reduction plots
generateMaskSeurat Generates mask from a Seurat object. Requires 'SeuratObject' package.
geom_mark_shape Annotate areas with polygonal shapes