80857d043e3b55271cb91476386cd4c3 *CITATION
72b892d6e4196182c14257ef56895870 *CONTENTS
dd7d4010118bda8d800c9c748da79153 *DESCRIPTION
9683cafdc7d1bfd37fc3fdcc303dfaf8 *INDEX
f5344ec28a4cfde6b8a6325520179217 *Meta/Rd.rds
7e6d1992ac0a24c5236823c5baba0c4f *Meta/hsearch.rds
177f7e98b91c872437381c5b7cdcdeb1 *Meta/nsInfo.rds
986f4a0af4ac1d3b39846e3f56a81246 *Meta/package.rds
f199ed9e74b14905cfee2fe0eabe89d8 *Meta/vignette.rds
1e1b7507f911822e0d510313f54116d1 *NAMESPACE
2b70052b6d9b56c37325d918691bbd7f *R-ex/Rex.zip
f07d3015c4220dea7a7be8c741d2985b *R/Ringo
e54af2bda62fb5c2d9934d6088c6f051 *R/Ringo.rdb
2e95f1e7455d52d17c9d0c1a18a434eb *R/Ringo.rdx
bd2edef8931d9b2386ba1fdadd91a064 *chtml/Ringo.chm
cffa86669919427a06344ffd09015702 *doc/Makefile
f9a2b9f7a81a56cdf355ccd5042c878a *doc/Ringo-Bibliography.bib
f105253edeeb69b1af3f5993ed69fb3e *doc/Ringo.R
540db2213a94c653970c960ef5a870b4 *doc/Ringo.Rnw
430393486a19854cf809de4c0bb66241 *doc/Ringo.pdf
fb7c5efc58686361781cabb83c317cc9 *doc/Ringo.tex
c764a26ecf0d6023b5c753cbc8333cac *doc/index.html
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8e164612155b94980a9cb3b9b7a148cb *exData/README.txt
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643ecee7477324452cbf1040dc5489a6 *exData/exampleX.rda
8455900bba7d71a31bbcffdbece9420e *exData/example_targets.txt
4bb3efa4b569917acddee6e3d9d5db33 *exData/reportersInexactMatchesHg18.rda
d020c2bea3ee4cc5de50e947df20e391 *exData/spottypes.txt
fcdadb92a98f84645552e4b48d6a28b0 *help/AnIndex
818dcefb4233af531b86da3e4a17edc6 *help/Rhelp.zip
e86a4fb998c8e1c6232874c6c70b8374 *html/00Index.html
62037f4e0e36ff227b6c3c8c09ca7048 *html/Ringo-internal.html
b9d3af2d87b0ca1d70fcfb6ea0b182f7 *html/arrayImage.html
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2023166e63decf564a67d75599793f3a *html/autocorr.html
2a28f548d5238c0ab21ba199d68322ad *html/cherByThreshold.html
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6ee6d620318f331529a70e032106b29c *html/chipAlongChrom.html
6ba0f05110108e17cdfcc4ea784427d3 *html/computeRunningMedians.html
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5b6e0b12a858c0fb601e0704074ffc5a *html/corrPlot.html
58d07b0b7ea77fcfa3d45aa3cdcf6d16 *html/extractProbeAnno.html
01e7caf8159fd003900a447ba61f3a9a *html/features2Probes.html
69f97913c9540001515f9039d73e4865 *html/findChersOnSmoothed.html
91c8bc3edc8cc2a890d001e24e2cde8d *html/ftr2xys.html
d84e59b7e456eac079ab8d3a44a05349 *html/getFeats.html
10e048ce6baaf232a4e371b29337a49c *html/newCER.html
7048895a2b1b1ec7d1885319fd15833c *html/nimblegenNorm.html
262359353288812eff2bbca3e2777136 *html/plotAutocorr.html
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bd3fba093b5ca242d1aba1bce936090c *html/posToProbeAnnoEnvironment.html
4303a23d1e6a60d81f134de9ff5bc06b *html/preprocess.html
afae3801eee087e6e022be6767ac8793 *html/probeAnnoClass.html
812c9e5efd2175fc9778e8d1b393403f *html/readNimblegen.html
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72a9d10a2be55b2f77d37803314215ef *html/relateCERs.html
2425ad423554e7ff7b63cd0ff361ed4c *html/sliding_meansd.html
ec54a425d0449e3bceeb1e4dd1088e1a *html/sliding_quantile.html
41f68eba8453b8757b7c3df97538a1f2 *html/upperBoundNull.html
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aacaea9b1dfb89afd5d3e6ba62732f4a *latex/Rhelp.zip
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4f272de661e805307c74103f6b17ba24 *man/Ringo.Rd.gz
a4e348745bcee4d7022d2807ffd80359 *scripts/condenseBlatOutput.pl
03e2250c84800725faddf439f287b14b *scripts/condenseExonerateOutput.pl
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abc83ca087b05944e99b736a18ec9cc0 *scripts/extractProbeSequenceFasta.pl
651d61b0dda52b6e924b69196870505d *scripts/graphChers2Transcripts.R
ed1c3d0e9bff0018ccf916c22a828c28 *scripts/makeProbeAnno.R
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