Entry: GeneTS-internal
Aliases: dominant.freqs.single periodogram.spec.single periodogram.spec periodogram.freq fisher.g.test.single is.constant.single bag.fun myrmvnorm isR181 getPackageVersion is.graph.from.BioC13 is.Rgraphviz.from.BioC13 is.graph.loaded is.Rgraphviz.loaded .First.lib
Keywords: internal
Description: Internal GeneTS Functions
URL: ../../../library/GeneTS/html/GeneTS-internal.html

Entry: avpg
Aliases: avgp
Keywords: ts
Description: Average Periodogram for Multiple (Genetic) Time Series
URL: ../../../library/GeneTS/html/avpg.html

Entry: bagging
Aliases: bagged.cov bagged.cor bagged.pcor
Keywords: multivariate
Description: Bagged Versions of Covariance and (Partial) Correlation Matrix
URL: ../../../library/GeneTS/html/bagging.html

Entry: caulobacter
Aliases: caulobacter
Keywords: datasets
Description: Microarray Time Series Data for 1444 Caulobacter Crescentus Genes
URL: ../../../library/GeneTS/html/caulobacter.html

Entry: cor.fit.mixture
Aliases: cor.fit.mixture cor.prob.nonzero
Keywords: htest
Description: Graphical Gaussian Models: Fit Mixture Distribution to Sample Correlation Coefficients
URL: ../../../library/GeneTS/html/cor.fit.mixture.html

Entry: cor0.estimate.kappa
Aliases: cor0.estimate.kappa
Keywords: htest
Description: Estimating the Degree of Freedom of the Null Distribution of the Correlation Coefficient
URL: ../../../library/GeneTS/html/cor0.estimate.kappa.html

Entry: cor0.test
Aliases: cor0.test
Keywords: htest
Description: Test of Vanishing (Partial) Correlation
URL: ../../../library/GeneTS/html/cor0.test.html

Entry: dcor0
Aliases: dcor0 pcor0 rcor0 ibeta
Keywords: distribution
Description: Distribution of the Vanishing Correlation Coefficient (rho=0) and Related Functions
URL: ../../../library/GeneTS/html/dcor0.html

Entry: dominant.freqs
Aliases: dominant.freqs
Keywords: ts
Description: Dominant Frequencies in Multiple (Genetic) Time Series
URL: ../../../library/GeneTS/html/dominant.freqs.html

Entry: fdr.control
Aliases: fdr.control
Keywords: htest
Description: Controlling the False Discovery Rate in Multiple Testing
URL: ../../../library/GeneTS/html/fdr.control.html

Entry: fdr.estimate.eta0
Aliases: fdr.estimate.eta0
Keywords: htest
Description: Estimate the Proportion of Null p-Values
URL: ../../../library/GeneTS/html/fdr.estimate.eta0.html

Entry: fisher.g.test
Aliases: fisher.g.test
Keywords: htest
Description: Fisher's Exact g Test for Multiple (Genetic) Time Series
URL: ../../../library/GeneTS/html/fisher.g.test.html

Entry: ggm.estimate.pcor
Aliases: ggm.estimate.pcor
Keywords: htest
Description: Graphical Gaussian Models: Small Sample Estimation of Partial Correlation
URL: ../../../library/GeneTS/html/ggm.estimate.pcor.html

Entry: ggm.plot.graph
Aliases: ggm.plot.graph ggm.make.graph show.edge.weights
Keywords: hplot
Description: Graphical Gaussian Models: Plotting the Network
URL: ../../../library/GeneTS/html/ggm.plot.graph.html

Entry: ggm.simulate.data
Aliases: ggm.simulate.data
Keywords: multivariate
Description: Graphical Gaussian Models: Simulation of of Data
URL: ../../../library/GeneTS/html/ggm.simulate.data.html

Entry: ggm.simulate.pcor
Aliases: ggm.simulate.pcor
Keywords: multivariate
Description: Graphical Gaussian Models: Simulation of Networks
URL: ../../../library/GeneTS/html/ggm.simulate.pcor.html

Entry: ggm.test.edges
Aliases: ggm.test.edges
Keywords: htest
Description: Graphical Gaussian Models: Testing Edges
URL: ../../../library/GeneTS/html/ggm.test.edges.html

Entry: is.constant
Aliases: is.constant
Keywords: ts
Description: Simple Check for Constant Time Series
URL: ../../../library/GeneTS/html/is.constant.html

Entry: kappa2N
Aliases: kappa2N N2kappa
Keywords: univar
Description: Determine the Sample Size from the Degree of Freedom of Correlation Distribution
URL: ../../../library/GeneTS/html/kappa2N.html

Entry: mat.convert
Aliases: sm2vec sm.indexes vec2sm
Keywords: utilities
Description: Convert Symmetric Matrix to Vector and Back
URL: ../../../library/GeneTS/html/mat.convert.html

Entry: mat.util
Aliases: is.positive.definite rank.condition is.square is.symmetric
Keywords: array
Description: Various Matrix Utilities
URL: ../../../library/GeneTS/html/mat.util.html

Entry: partial.cor
Aliases: partial.cor cor2pcor pcor2cor
Keywords: multivariate
Description: Partial Correlation from Correlation Matrix (and Vice Versa)
URL: ../../../library/GeneTS/html/pcor.html

Entry: periodogram
Aliases: periodogram
Keywords: ts
Description: Periodogram Power Spectral Density
URL: ../../../library/GeneTS/html/periodogram.html

Entry: pseudoinverse
Aliases: pseudoinverse
Keywords: algebra
Description: Pseudoinverse of a Matrix
URL: ../../../library/GeneTS/html/pseudoinverse.html

Entry: robust.boot
Aliases: robust.boot
Keywords: nonparametric
Description: Robust Error Resistant Bootstrap Algorithm
URL: ../../../library/GeneTS/html/robust.boot.html

Entry: standardize.cov
Aliases: standardize.cov rebuild.cov
Keywords: multivariate
Description: Standardize Covariance Matrix
URL: ../../../library/GeneTS/html/standardize.cov.html

Entry: z.transform
Aliases: z.transform hotelling.transform
Keywords: univar
Description: Variance-Stabilizing Transformations of the Correlation Coefficient
URL: ../../../library/GeneTS/html/z.transform.html
