\Header{getTDRows}{Functions to create hypertext links that can be placed in a table
cell of a HTML file}
\alias{getQuery4LL}{getTDRows}
\alias{getQuery4UG}{getTDRows}
\alias{getQueryLink}{getTDRows}
\keyword{manip}{getTDRows}
\begin{Description}\relax
Given a vector of ids, the functions will create a vector of hypertext
links to a defined public repositories such as LocusLink, UniGene
.... The linkages can be placed in a html file constructed by
\code{\Link{ll.htmlpage}}
\end{Description}
\begin{Usage}
\begin{verbatim}
getTDRows(ids, repository = "ug")
getQueryLink(ids, repository = "ug")
getQuery4UG(ids)
getQuery4LL(ids)
\end{verbatim}
\end{Usage}
\begin{Arguments}
\begin{ldescription}
\item[\code{ids}] \code{ids} a vector of character string for ids that will
used to construct hypertext links
\item[\code{repository}] \code{repository} A character string for the name of
a public repositories. Valid values include "ll", "ug"
\end{ldescription}
\end{Arguments}
\begin{Details}\relax
\code{\Link{getQuery4LL}} constructs hypertext links to LocusLink
using the provided ids. 

\code{\Link{getQuery4UG}} constructs hypertext links to UniGene using
the provided ids.

\code{\Link{getQueryLink}} directs calls to construct hypertext links
using the provided ids.

\code{getTDRows}
\end{Details}
\begin{Value}
Returns a vector of character strings representing the hypertext links.
\end{Value}
\begin{Note}\relax
The functions are part of Bioconductor project at Dana-Farber
Cancer Institute to provide Bioinformatics functionalities through R
\end{Note}
\begin{Author}\relax
Jianhua Zhang
\end{Author}
\begin{SeeAlso}\relax
\code{\Link{ll.htmlpage}}
\end{SeeAlso}
\begin{Examples}
\begin{ExampleCode}
ids <- c("Hs.78713", "Hs.11184", "Hs.281866","Hs.31314")
getTDRows(ids)  
\end{ExampleCode}
\end{Examples}

