Package: affy
Version: 1.4.32
Date: 2004-06-07
Title: Methods for Affymetrix Oligonucleotide Arrays
Author: Rafael A. Irizarry <rafa@jhu.edu>, Laurent Gautier
        <laurent@cbs.dtu.dk>, and Benjamin Milo Bolstad
        <bolstad@stat.Berkeley.EDU> with contributions from Magnus
        Astrand <Magnus.Astrand@astrazeneca.com>, Leslie M. Cope
        <cope@mts.jhu.edu>, Robert Gentleman Jeff Gentry Wolfgang
        Huber James MacDonald <jmacdon@med.umich.edu> Crispin Miller
        <cmiller@picr.man.ac.uk> Benjamin I. P. Rubinstein Christopher
        Workman <workman@cbs.dtu.dk>, John Zhang
Maintainer: Rafael A. Irizarry <rafa@jhu.edu>
Depends: R (>= 1.9.0), Biobase (>= 1.3.10), reposTools, tkWidgets (>=
        1.2.2)
Description: The package contains functions for exploratory
        oligonucleotide array analysis. The dependance to tkWidgets
        only concerns few convenience functions. 'affy' is fully
        functional without it.
License: LGPL version 2 or newer
Collate: ProgressBarText.R ppset.ttest.R ppsetApply.R expressoWidget.R
        getCDFenv.R AffyRNAdeg.R avdiff.R barplot.ProbeSet.R
        bg.Affy.chipwide.R bg.R expresso.R fit.li.wong.R
        generateExprVal.method.avgdiff.R
        generateExprVal.method.liwong.R generateExprVal.method.mas.R
        generateExprVal.method.medianpolish.R
        generateExprVal.method.playerout.R hlog.R justrma.R
        loess.normalize.R maffy.R mas5.R merge.AffyBatch.R
        normalize.constant.R normalize.contrasts.R
        normalize.invariantset.R normalize.loess.R normalize.qspline.R
        normalize.quantiles.R pairs.AffyBatch.R plot.density.R
        plotLocation.R plot.ProbeSet.R pmcorrect.mas.R AffyBatch.R
        mva.pairs.R ProbeSet.R read.affybatch.R rma.R
        split.AffyBatch.R summary.R tukey.biweight.R whatcdf.R
        xy2indices.R zzz.R
Packaged: Tue Jun 8 14:19:14 2004; madman
Built: R 1.9.1; powerpc-apple-darwin6.8; 2004-08-24 20:15:19; unix
