Extensive documentation, FAQs and known bugs are described on our GitHub wiki pages.
Check the installation help if you want to run PhyloProfile on your own machine. We additionally offer some overview on how to format your own data to visualize and analyze it with PhyloProfile. The Walkthrough explains our supported input files and gives an idea of how to use PhyloProfile.
Things don't work as you expect? Check our FAQ to get an idea what could have gone wrong. This couldn't solve your problem? Please open an issue on GitHub or contact us via email at tran@bio.uni-frankfurt.de.