combineSCE {singleCellTK} | R Documentation |
Combine a list of SingleCellExperiment objects as one SingleCellExperiment object
combineSCE(sceList, by.r, by.c, combined)
sceList |
A list contains SingleCellExperiment objects. Currently, combineSCE function only support combining SCE objects with assay in dgCMatrix format. It does not support combining SCE with assay in delayedArray format. |
by.r |
Specifications of the columns used for merging rowData. See 'Details'. |
by.c |
Specifications of the columns used for merging colData. See 'Details'. |
combined |
logical; if TRUE, it will combine the list of SingleCellExperiment objects. See 'Details'. |
A SingleCellExperiment object which combines all objects in sceList. The colData is merged.
combinedsce <- combineSCE(list(sce,sce), by.r = NULL, by.c = NULL, combined = TRUE)