get_qc {scone} | R Documentation |
Get Quality Control Matrix
get_qc(x) ## S4 method for signature 'SconeExperiment' get_qc(x)
x |
an object of class |
NULL or the quality control (QC) metric matrix.
set.seed(42) mat <- matrix(rpois(500, lambda = 5), ncol=10) colnames(mat) <- paste("X", 1:ncol(mat), sep="") obj <- SconeExperiment(mat, qc = cbind(colSums(mat),colSums(mat > 0))) qc = get_qc(obj)