plotEgoNetwork {scHOT} | R Documentation |
the plotEgoNetwork function plots network graphs with edges coloured by weights in the network
plotEgoNetwork( scHOT, hubnode, network, weight = "higherOrderStatistic", subset = FALSE, thresh = NULL )
scHOT |
a scHOT object |
hubnode |
is a character vector of node(s) to include as hub nodes |
network |
is an igraph network |
weight |
A string indicates the column name stored in scHOT_output slot that are used as the weights of the network |
subset |
is a logical asking if you should subset based on the weight (default FALSE) |
thresh |
is the subset weight threshold |
igraph
object containing the network graphed.
Produces an igraph plot