pmultinom {methylMnM} | R Documentation |
Call C programs to R for calculate p-value of each bin with multinomial distribution.
pmultinom(T, SIZE,length, P1, P2, P3, P4, C1, C2, pvalue=rep(0,length(T)))
T |
Statistic. |
SIZE |
The sum of MeDIP-seq count and MRE-seq count of each bin of two samples. |
length |
The number of bins. |
P1 |
The probability of MeDIP-seq of sample 1 in multinomial distribution. |
P2 |
The probability of MeDIP-seq of sample 2 in multinomial distribution. |
P3 |
The probability of MRE-seq of sample 1 in multinomial distribution. |
P4 |
The probability of MRE-seq of sample 2 in multinomial distribution. |
C1 |
A constant to balance MeDIP-seq of sample 1 and sample 2. |
C2 |
A constant to balance MRE-seq of sample 1 and sample 2. |
pvalue |
p-values of windows. |
p-value.
Yan Zhou, Bo Zhang, Nan Lin, BaoXue Zhang and Ting Wang
T<-4 SIZE<-200 p<-c(0.25,0.25,0.25,0.25) c1<-1 c2<-1 length<-1 f<-pmultinom(T, SIZE,length, p[1], p[2], p[3], p[4], c1, c2, pvalue=rep(0,length(T)))