config_ATC {cola} | R Documentation |
Adjust parameters for default ATC method
config_ATC(cor_fun = stats::cor, min_cor = 0, power = 1, k_neighbours = -1, group = NULL, cores = 1, ...)
cor_fun |
A function that calculates correlations from a matrix (on matrix rows). |
min_cor |
Cutoff for the minimal absolute correlation. |
power |
Power on the correlation values. |
k_neighbours |
Number of the closest neighbours to use. |
group |
A categorical variable. |
cores |
Number of cores. |
... |
Other arguments passed to |
This function changes the default parameters for ATC method. All the arguments in this function all pass to ATC
.
# use Spearman correlation config_ATC(cor_fun = function(m) stats::cor(m, method = "spearman")) # use knn config_ATC(k_neighbours = 100)