compare_signatures-HierarchicalPartition-method {cola} | R Documentation |
Compare Signatures from Different Nodes
## S4 method for signature 'HierarchicalPartition' compare_signatures(object, merge_node = merge_node_param(), method = c("euler", "upset"), upset_max_comb_sets = 20, verbose = interactive(), ...)
object |
A |
merge_node |
Parameters to merge sub-dendrograms, see |
method |
Method to visualize. |
upset_max_comb_sets |
Maximal number of combination sets to show. |
verbose |
Whether to print message. |
... |
Other arguments passed to |
It plots an Euler diagram or a UpSet plot showing the overlap of signatures from different nodes.
On each node, the number of subgroups is inferred by suggest_best_k,ConsensusPartition-method
.
data(golub_cola_rh) compare_signatures(golub_cola_rh)