cutoffZscoreSequenceSet {PWMEnrich}R Documentation

Z-score calculation for cutoff hits for group of sequences

Description

The Z-score is calculated as if the sequence came for one very long sequence

Usage

cutoffZscoreSequenceSet(scores, seq.len, pwm.len, bg.P)

Arguments

scores

the hit counts for the sequences

seq.len

the length distribution of sequences

pwm.len

the length distribution of the PWMs

bg.P

background probabilities of observing a motif hit at nucleotide resolution

Value

Z-score


[Package PWMEnrich version 4.28.1 Index]