TCGA_GENERIC_MET_ClusterProbes_Helper_ClusterGenes_with_hclust {MethylMix}R Documentation

The TCGA_GENERIC_MET_ClusterProbes_Helper_ClusterGenes_with_hclust function

Description

Internal. Cluster probes into genes.

Usage

TCGA_GENERIC_MET_ClusterProbes_Helper_ClusterGenes_with_hclust(Gene,
  ProbeAnnotation, MET_Cancer, MET_Normal = NULL, CorThreshold = 0.4)

Arguments

Gene

gene.

ProbeAnnotation

data set matching probes to genes.

MET_Cancer

data matrix for cancer samples.

MET_Normal

data matrix for normal samples.

CorThreshold

correlation threshold for cutting the clusters.

Value

List with the clustered data sets and the mapping between probes and genes.


[Package MethylMix version 2.22.0 Index]