AddMeta {IRISFGM}R Documentation

AddMeta

Description

This function can import cell annotation information to IRIS-FGM object.

Usage

AddMeta(object, ...)

.addMeta(object = NULL, meta.info = NULL)

## S4 method for signature 'IRISFGM'
AddMeta(object = NULL, meta.info = NULL)

Arguments

object

input IRIS-FGM object

...

other arguments passed to methods

meta.info

meta information table should be a data frame with rows representing cell and coloumn representing different group condition

Value

It will add meta informatoin to IRISFGM.

Examples

x <- matrix(rnorm(100),ncol = 10) 
colnames(x) <- paste0("cell",1:ncol(x))
rownames(x) <- paste0("gene",1:nrow(x))
my_meta <- data.frame(row.names = paste0("cell",1:ncol(x)),
cluster = c(rep("ClusterA",5),rep("ClusterB",5)))
object <- CreateIRISFGMObject(x)
object <- AddMeta(object, 
meta.info = my_meta)


[Package IRISFGM version 1.0.0 Index]