get_dldir {GEOfastq}R Documentation

Gets part of path to download bulk RNAseq sample from EBI or NCBI

Description

Gets part of path to download bulk RNAseq sample from EBI or NCBI

Usage

get_dldir(srr, type = c("ebi", "ncbi"))

Arguments

srr

SRR/ERR run name

type

Either 'ebi' or 'ncbi'

Value

String path used by get_fastqs.

Examples


get_dldir('SRR014242')


[Package GEOfastq version 1.0.0 Index]