get_ebi_fastqs {GEOfastq} | R Documentation |
Much faster to use aspera than ftp
get_ebi_fastqs( srp_meta, srr_name, data_dir, method = c("ftp", "aspera"), max_rate = "300m" )
srp_meta |
|
srr_name |
Run accession as string. |
data_dir |
Path to folder that fastq files will be downloaded to. Will be created if doesn't exist. |
method |
One of |
max_rate |
Used when |
Integer return code from ascp or download.file
.