wrapper.compareNormalizationD_HC {DAPAR} | R Documentation |
Wrapper to the function that plot to compare the quantitative proteomics data before and after normalization.
wrapper.compareNormalizationD_HC( objBefore, objAfter, condsForLegend = NULL, ... )
objBefore |
A dataframe that contains quantitative data before normalization. |
objAfter |
A dataframe that contains quantitative data after normalization. |
condsForLegend |
A vector of the conditions (one condition per sample). |
... |
arguments for palette |
A plot
Samuel Wieczorek
utils::data(Exp1_R25_pept, package='DAPARdata') obj <- Exp1_R25_pept conds <- Biobase::pData(obj)[,"Condition"] objAfter <- wrapper.normalizeD(obj = obj, method = "QuantileCentering", conds=conds, type = "within conditions") wrapper.compareNormalizationD_HC(obj, objAfter, conds)