plotTrajHeatmap {CytoTree} | R Documentation |
Visualization heatmap of intermediate cells of CYT
plotTrajHeatmap( object, cutoff = 0, markers = NULL, color = colorRampPalette(c("blue", "white", "red"))(100), scale = "row", ... )
object |
An CYT object |
cutoff |
numeric. value to identify intermediate state cells |
markers |
markers to plot on the heatmap |
color |
vector. Colors used in heatmap. |
scale |
character. Whether the values should be centered and scaled in either the row direction or the column direction, or none. Corresponding values are "row", "column" and "none" |
... |
options to pass on to the |
ggplot2 figure