\HeaderA{eset\_estrogen\_rma}{The data from the estrogen package processed using the RMA algorithm}{eset.Rul.estrogen.Rul.rma}
\keyword{datasets}{eset\_estrogen\_rma}
\begin{Description}\relax
This data is taken from the \pkg{estrogen} package. It was created to be used in the vignette for the \pkg{puma} pacakge. It can be produced using the following code:

\begin{alltt}
                data(affybatch.estrogen)
                eset\_estrogen\_mmgmos <- rma(affybatch.estrogen)
\end{alltt}
\end{Description}
\begin{Usage}
\begin{verbatim}data(eset_estrogen_rma)\end{verbatim}
\end{Usage}
\begin{Format}\relax
An \code{\LinkA{ExpressionSet}{ExpressionSet}} object containing expression levels for 8 HG\_U95Av2 arrays, in a 2 x 2 factorial design, with 2 replicates for each combination of factors. The factors are estrogen (absent of present) and time.h (10 or 48).
\end{Format}
\begin{SeeAlso}\relax
\code{\LinkA{affybatch.estrogen}{affybatch.estrogen}}
\code{\LinkA{eset\_estrogen\_mmgmos}{eset.Rul.estrogen.Rul.mmgmos}}
\end{SeeAlso}
\begin{Examples}
\begin{ExampleCode}
data(eset_estrogen_rma)
show(eset_estrogen_rma)
exprs(eset_estrogen_rma)[1:3,1:3]
assayDataElement(eset_estrogen_rma,"se.exprs")[1:3,1:3]
\end{ExampleCode}
\end{Examples}

