gnfCerebHi {MAQCsubset}R Documentation

Gene lists for hi or low abundance in cerebellum according to Novartis GNF symatlas

Description

Data frames with gene lists for hi or low abundance in cerebellum according to Novartis GNF symatlas

Usage

data(gnfCerebHi)
data(gnfCerebLow)

Details

The symatlas.gnf.org database was searched using the gcrma version of human gene atlas for genes having expression in cerebellum at least 3 times (or at most 1/3 times) median expression over all organs surveyed. The resulting gene lists were intersected with genes present on GE codelink (version used in MAQCsubset) and hgu95a.

Value

data.frame instances with columns providing gene name, affy probe set identifier, codelink probe identifier, illuminaHumanv1 identifier.

Author(s)

Vince Carey <stvjc@channing.harvard.edu>

Examples

data(gnfCerebHi)
gnfCerebHi[1:3,]

[Package MAQCsubset version 1.0.13 Index]