Last updated on 2025-12-13 01:51:38 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.44 | 244.99 | 257.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.16 | 254.00 | 264.16 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 23.00 | 317.11 | 340.11 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 29.00 | 402.64 | 431.64 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.20 | 300.73 | 315.93 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.16 | 251.46 | 265.62 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 170.00 | 180.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 201.00 | 212.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 232.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/109s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.527, system: 0.041, elapsed: 1.756 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.631, system: 0.170, elapsed: 14.147 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.018, elapsed: 0.336 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.108, system: 0.266, elapsed: 6.177 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.008, elapsed: 0.258 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.207, system: 0.529, elapsed: 23.435 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.691, system: 0.072, elapsed: 2.232 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.870, system: 0.265, elapsed: 14.409 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.020, elapsed: 0.258 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.199, system: 0.279, elapsed: 5.149 seconds]
Computing values for grid cells...
... done. [user: 0.190, system: 0.008, elapsed: 0.237 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.707, system: 0.681, elapsed: 23.030 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.796, system: 0.078, elapsed: 2.217 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.474, system: 0.243, elapsed: 10.502 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.015, elapsed: 0.220 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.883, system: 0.249, elapsed: 4.427 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.017, elapsed: 0.204 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.243, system: 0.278, elapsed: 1.043 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.406, system: 0.929, elapsed: 19.388 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.569, system: 0.058, elapsed: 1.694 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.937, system: 0.402, elapsed: 12.439 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.019, elapsed: 0.279 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.931, system: 0.219, elapsed: 5.293 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.006, elapsed: 0.240 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.759, system: 0.525, elapsed: 15.989 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.218, system: 1.265, elapsed: 36.724 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/140s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.606, system: 0.043, elapsed: 2.560 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.449, system: 0.094, elapsed: 13.628 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.014, elapsed: 0.288 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.754, system: 0.193, elapsed: 5.803 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.005, elapsed: 0.265 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.736, system: 0.376, elapsed: 23.423 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.774, system: 0.077, elapsed: 3.170 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.013, system: 0.423, elapsed: 16.569 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.018, elapsed: 0.336 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.950, system: 0.202, elapsed: 6.606 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.003, elapsed: 0.284 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.667, system: 0.765, elapsed: 27.883 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.577, system: 0.025, elapsed: 2.647 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.454, system: 0.049, elapsed: 17.115 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.011, elapsed: 0.388 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.758, system: 0.160, elapsed: 7.391 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.005, elapsed: 0.346 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.115, system: 0.258, elapsed: 1.398 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.936, system: 0.539, elapsed: 30.505 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.560, system: 0.027, elapsed: 2.879 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.438, system: 0.059, elapsed: 18.825 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.013, elapsed: 0.423 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.842, system: 0.180, elapsed: 6.546 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.231 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.654, system: 0.510, elapsed: 19.011 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.509, system: 0.816, elapsed: 49.107 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64