bio.convert {BioIDMapper} | R Documentation |
This function is main interface for mapping service. It can support NCBI mapping and UniProt mapping, from gene level, protein level, functional level, and metabolomic level.
bio.convert(id_list = "character", from = "numeric", to = "numeric")
id_list |
the list of biological ids |
from |
Biokey number for source biological type. It can be found by bio.type() |
to |
Biokey number for destination biological type. It can be found by bio.type() |
It converts a list of ids from one biological type to another. For detail, please check vegnette "demonstration" section.
a result matrix will be returned with source type in the first column and the destination type in the last column
Xiaoyong Sun
data(glist) bio.type(1) bio.type(5) bio.convert(glist, 1, 5)->done