* using log directory 'd:/Rcompile/CRANpkg/local/4.1/pmparser.Rcheck'
* using R version 4.1.3 (2022-03-10)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'pmparser/DESCRIPTION' ... OK
* this is package 'pmparser' version '1.0.16'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'pmparser' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [8s] NOTE
Initiating curl with CURL_SSL_BACKEND: openssl
* checking Rd files ... [1s] OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [2s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [9s] ERROR
  Running 'testthat.R' [8s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(pmparser)
  Initiating curl with CURL_SSL_BACKEND: openssl
  > 
  > test_check('pmparser')
  [ FAIL 4 | WARN 4 | SKIP 4 | PASS 67 ]
  
  == Skipped tests ===============================================================
  * On CRAN (4)
  
  == Failed tests ================================================================
  -- Error ('test_modify_pubmed_db_dup.R:51:3'): modifyPubmedDb create is unique --
  <SSL_CONNECT_ERROR/GenericCurlError/error/condition>
  Error in `function (type, msg, asError = TRUE) 
  {
      if (!is.character(type)) {
          i = match(type, CURLcodeValues)
          typeName = if (is.na(i)) 
              character()
          else names(CURLcodeValues)[i]
      }
      typeName = gsub("^CURLE_", "", typeName)
      fun = (if (asError) 
          stop
      else warning)
      fun(structure(list(message = msg, call = sys.call()), class = c(typeName, 
          "GenericCurlError", "error", "condition")))
  }(35L, "error:1407742E:SSL routines:SSL23_GET_SERVER_HELLO:tlsv1 alert protocol version", 
      TRUE)`: error:1407742E:SSL routines:SSL23_GET_SERVER_HELLO:tlsv1 alert protocol version
  Backtrace:
      x
   1. +-pmparser::modifyPubmedDb(...) at test_modify_pubmed_db_dup.R:51:2
   2. | \-pmparser:::getReadme(con = con)
   3. |   \-RCurl::getURL(glue("{remoteDir}/{filename}"))
   4. |     \-RCurl::curlPerform(curl = curl, .opts = opts, .encoding = .encoding)
   5. \-RCurl (local) `<fn>`(...)
  -- Error ('test_modify_pubmed_db_dup.R:67:3'): modifyPubmedDb update is unique --
  Error in `gzfile(file, open = "rb")`: cannot open the connection
  Backtrace:
      x
   1. \-pmparser::modifyPubmedDb(...) at test_modify_pubmed_db_dup.R:67:2
   2.   \-pmparser::getCitation(...)
   3.     \-pmparser:::writeTableInChunks(...)
   4.       +-R.utils::countLines(path)
   5.       \-R.utils::countLines.default(path)
   6.         \-base::gzfile(file, open = "rb")
  -- Error ('test_modify_pubmed_db_std.R:22:3'): modifyPubmedDb create matches standard --
  <SSL_CONNECT_ERROR/GenericCurlError/error/condition>
  Error in `function (type, msg, asError = TRUE) 
  {
      if (!is.character(type)) {
          i = match(type, CURLcodeValues)
          typeName = if (is.na(i)) 
              character()
          else names(CURLcodeValues)[i]
      }
      typeName = gsub("^CURLE_", "", typeName)
      fun = (if (asError) 
          stop
      else warning)
      fun(structure(list(message = msg, call = sys.call()), class = c(typeName, 
          "GenericCurlError", "error", "condition")))
  }(35L, "error:1407742E:SSL routines:SSL23_GET_SERVER_HELLO:tlsv1 alert protocol version", 
      TRUE)`: error:1407742E:SSL routines:SSL23_GET_SERVER_HELLO:tlsv1 alert protocol version
  Backtrace:
      x
   1. +-pmparser::modifyPubmedDb(...) at test_modify_pubmed_db_std.R:22:2
   2. | \-pmparser:::getReadme(con = con)
   3. |   \-RCurl::getURL(glue("{remoteDir}/{filename}"))
   4. |     \-RCurl::curlPerform(curl = curl, .opts = opts, .encoding = .encoding)
   5. \-RCurl (local) `<fn>`(...)
  -- Error ('test_modify_pubmed_db_std.R:42:3'): modifyPubmedDb update matches standard --
  Error in `gzfile(file, open = "rb")`: cannot open the connection
  Backtrace:
      x
   1. \-pmparser::modifyPubmedDb(...) at test_modify_pubmed_db_std.R:42:2
   2.   \-pmparser::getCitation(...)
   3.     \-pmparser:::writeTableInChunks(...)
   4.       +-R.utils::countLines(path)
   5.       \-R.utils::countLines.default(path)
   6.         \-base::gzfile(file, open = "rb")
  
  [ FAIL 4 | WARN 4 | SKIP 4 | PASS 67 ]
  Error: Test failures
  In addition: Warning message:
  call dbDisconnect() when finished working with a connection 
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking re-building of vignette outputs ... [2s] OK
* checking PDF version of manual ... OK
* DONE
Status: 1 ERROR, 1 NOTE