* using log directory 'd:/Rcompile/CRANpkg/local/4.0/nlme.Rcheck'
* using R version 4.0.5 (2021-03-31)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* checking for file 'nlme/DESCRIPTION' ... OK
* this is package 'nlme' version '3.1-157'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'nlme' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking use of S3 registration ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
** checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [57s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compiled code ... OK
* checking examples ...
** running examples for arch 'i386' ... [77s] OK
** running examples for arch 'x64' ... [79s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
** running tests for arch 'i386' ... [80s] OK
  Creating 'extras.R'
  Running 'anova.gls.R' [1s]
  Running 'augPred_lab.R' [30s]
  Running 'augPredmissing.R' [1s]
  Running 'coef.R' [1s]
  Comparing 'coef.Rout' to 'coef.Rout.save' ... OK
  Running 'contrMat.R' [1s]
  Running 'corFactor.R' [1s]
  Running 'data.frame.R' [1s]
  Running 'deparse.R' [1s]
  Running 'deviance.R' [1s]
  Running 'fitted.R' [1s]
  Running 'getData.R' [1s]
  Running 'getVarCov.R' [1s]
  Running 'gls.R' [1s]
  Running 'gnls-ch8.R' [1s]
  Running 'lmList.R' [1s]
  Running 'lme.R' [5s]
  Comparing 'lme.Rout' to 'lme.Rout.save' ... OK
  Running 'missing.R' [1s]
  Comparing 'missing.Rout' to 'missing.Rout.save' ... OK
  Running 'nlme.R' [3s]
  Running 'nlme2.R' [2s]
  Running 'predict.lme.R' [1s]
  Running 'scoping.R' [1s]
  Running 'sigma-fixed-etc.R' [20s]
  Running 'updateLme.R' [2s]
  Running 'varConstProp.R' [2s]
  Running 'varIdent.R' [0s]
** running tests for arch 'x64' ... [78s] OK
  Creating 'extras.R'
  Running 'anova.gls.R' [1s]
  Running 'augPred_lab.R' [27s]
  Running 'augPredmissing.R' [1s]
  Running 'coef.R' [1s]
  Comparing 'coef.Rout' to 'coef.Rout.save' ... OK
  Running 'contrMat.R' [1s]
  Running 'corFactor.R' [1s]
  Running 'data.frame.R' [1s]
  Running 'deparse.R' [1s]
  Running 'deviance.R' [1s]
  Running 'fitted.R' [1s]
  Running 'getData.R' [1s]
  Running 'getVarCov.R' [1s]
  Running 'gls.R' [1s]
  Running 'gnls-ch8.R' [1s]
  Running 'lmList.R' [1s]
  Running 'lme.R' [5s]
  Comparing 'lme.Rout' to 'lme.Rout.save' ... OK
  Running 'missing.R' [1s]
  Comparing 'missing.Rout' to 'missing.Rout.save' ... OK
  Running 'nlme.R' [3s]
  Running 'nlme2.R' [2s]
  Running 'predict.lme.R' [2s]
  Running 'scoping.R' [1s]
  Running 'sigma-fixed-etc.R' [21s]
  Running 'updateLme.R' [2s]
  Running 'varConstProp.R' [2s]
  Running 'varIdent.R' [1s]
* checking PDF version of manual ... OK
* DONE
Status: OK