* using log directory 'd:/Rcompile/CRANpkg/local/4.0/abn.Rcheck' * using R version 4.0.5 (2021-03-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'abn/DESCRIPTION' ... OK * this is package 'abn' version '2.7-0' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'abn' can be installed ... OK * checking installed package size ... NOTE installed size is 7.0Mb sub-directories of 1Mb or more: libs 4.1Mb * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [26s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in shell scripts ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compiled code ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ** running examples for arch 'i386' ... [15s] OK ** checking differences from 'abn-Ex_i386.Rout' to 'abn-Ex.Rout.save' ... OK 2c2 < abn version 2.7-0 (2022-04-06) is loaded. --- > abn version 2.7-0 (2022-04-05) is loaded. 180c180 < + difference <- res.c$mlik - res.inla$mlik --- > + summary(res.c$mlik- res.inla$mlik) 181a182,183 > Min. 1st Qu. Median Mean 3rd Qu. Max. > 0 0 0 0 0 0 1353c1355 < [1] "abn version 2.7-0 (2022-04-06)" --- > [1] "abn version 2.7-0 (2022-04-05)" 1355,1357c1357,1372 < > ## Not run: < > ##D abn.Version("system") < > ## End(Not run) --- > > abn.Version("system") > $R > [1] "R Under development (unstable) (2022-01-04 r81445)" > > $abn > [1] "2.7-0 (2022-04-05)" > > $gsl > [1] "2.6" > > $JAGS > [1] '4.3.0' > > $INLA > [1] "22.03.16" > ** running examples for arch 'x64' ... [16s] OK ** checking differences from 'abn-Ex_x64.Rout' to 'abn-Ex.Rout.save' ... OK 2c2 < abn version 2.7-0 (2022-04-06) is loaded. --- > abn version 2.7-0 (2022-04-05) is loaded. 180c180 < + difference <- res.c$mlik - res.inla$mlik --- > + summary(res.c$mlik- res.inla$mlik) 181a182,183 > Min. 1st Qu. Median Mean 3rd Qu. Max. > 0 0 0 0 0 0 1353c1355 < [1] "abn version 2.7-0 (2022-04-06)" --- > [1] "abn version 2.7-0 (2022-04-05)" 1355,1357c1357,1372 < > ## Not run: < > ##D abn.Version("system") < > ## End(Not run) --- > > abn.Version("system") > $R > [1] "R Under development (unstable) (2022-01-04 r81445)" > > $abn > [1] "2.7-0 (2022-04-05)" > > $gsl > [1] "2.6" > > $JAGS > [1] '4.3.0' > > $INLA > [1] "22.03.16" > * checking for unstated dependencies in 'tests' ... OK * checking tests ... ** running tests for arch 'i386' ... [76s] OK Running 'testthat.R' [76s] Comparing 'testthat.Rout' to 'testthat.Rout.save' ...11c11 < abn version 2.7-0 (2022-04-06) is loaded. --- > abn version 2.7-0 (2022-04-05) is loaded. ** running tests for arch 'x64' ... [66s] OK Running 'testthat.R' [66s] Comparing 'testthat.Rout' to 'testthat.Rout.save' ...11c11 < abn version 2.7-0 (2022-04-06) is loaded. --- > abn version 2.7-0 (2022-04-05) is loaded. * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking re-building of vignette outputs ... [1s] OK * checking PDF version of manual ... OK * DONE Status: 1 NOTE