* using log directory 'd:/Rcompile/CRANpkg/local/4.0/EmissV.Rcheck' * using R version 4.0.5 (2021-03-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'EmissV/DESCRIPTION' ... OK * this is package 'EmissV' version '0.665.6.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'EmissV' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [31s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [31s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [108s] ERROR Running 'testthat.R' [108s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(EmissV) > > test_check("EmissV") using a example emission factor (values calculated from CETESB 2015): CO PM Light Duty Vehicles Gasohol 1.75 [g/km] 0.0013 [g/km] Light Duty Vehicles Ethanol 10.04 [g/km] 0.0000 [g/km] Light Duty Vehicles Flex 0.39 [g/km] 0.0010 [g/km] Diesel Trucks 0.45 [g/km] 0.0612 [g/km] Diesel Urban Busses 0.77 [g/km] 0.1052 [g/km] Diesel Intercity Busses 1.48 [g/km] 0.1693 [g/km] Gasohol Motorcycles 1.61 [g/km] 0.0000 [g/km] Flex Motorcycles 0.75 [g/km] 0.0000 [g/km] Emission factors: CO PM Light Duty Vehicles Gasohol 1.75 [g/km] 0.0013 [g/km] Light Duty Vehicles Ethanol 10.04 [g/km] 0.0000 [g/km] Light Duty Vehicles Flex 0.39 [g/km] 0.0010 [g/km] Diesel Trucks 0.45 [g/km] 0.0612 [g/km] Diesel Urban Busses 0.77 [g/km] 0.1052 [g/km] Diesel Intercity Busses 1.48 [g/km] 0.1693 [g/km] Gasohol Motorcycles 1.61 [g/km] 0.0000 [g/km] Flex Motorcycles 0.75 [g/km] 0.0000 [g/km] processing Chururuba area ... Grid information from: D:/temp/Rtmp0sQ5sp/RLIBS_1caf056ed5acb/EmissV/extdata/wrfinput_d01 fraction of Chururuba area inside the domain = 0.944981686027802 processing Juruzinha area ... Grid information from: D:/temp/Rtmp0sQ5sp/RLIBS_1caf056ed5acb/EmissV/extdata/wrfinput_d01 Total of CO : 1676996.43578795 t year-1 FISH not found in total ! FISH not found in total ! calculating emissions for CO as aerosol ... Total of CO : 1676996.43578795 t year-1 calculating emissions for CO using molar mass = 28 ... Grid information from: D:/temp/Rtmp0sQ5sp/RLIBS_1caf056ed5acb/EmissV/extdata/wrfinput_d01 reading EDGAR emissions, output unit is g m-2 s-1 ... from edgar_co_test.nc emi_co x 1.000000 Using raster from inventory for FISH ... Grid output: 99 columns 93 rows Grid information from: vertical.nc Grid information from: D:/temp/Rtmp0sQ5sp/RLIBS_1caf056ed5acb/EmissV/extdata/wrfinput_d03 using length as emission variable Number of lat points 51 Number of lon points 51 using length as emission variable Number of lat points 51 Number of lon points 51 convective, h/L = -5.7372346528973 using weil max= 31 convective, h/L = -8.61326442721792 strong convective, h/L = -16.3733115022513 using weil max= 155 strong convective, h/L = -33.003300330033 using weil max= 217 strong convective, h/L = -67.7966101694915 strong convective, h/L = -79.3650793650794 strong convective, h/L = -110.650069156293 strong convective, h/L = -32.0056899004267 stable, h/L = 200 - calm, U= 0.11 m/s stable, h/L = 200 - windy, U= 3.11 m/s neutral, h/L = 0.956937799043062 * max iterations reached! Grid information from: vertical.nc Layer limits for grid position lat= -23.5803346633911 lon= -44.9668502807617 height= 0.00 m k= 1 height= 59.74 m k= 2 height= 145.50 m k= 3 height= 257.90 m k= 4 height= 397.87 m k= 5 height= 575.59 m k= 6 height= 802.06 m k= 7 height= 1070.66 m k= 8 height= 1532.39 m k= 9 height= 2014.39 m k= 10 height= 2519.01 m k= 11 height= 3049.04 m k= 12 height= 4035.38 m k= 13 height= 5020.68 m k= 14 height= 6005.89 m k= 15 height= 6992.68 m k= 16 height= 7982.44 m k= 17 height= 8976.27 m k= 18 height= 9968.42 m k= 19 height= 10957.52 m k= 20 height= 11941.38 m k= 21 height= 12920.99 m k= 22 height= 13908.15 m k= 23 height= 14879.66 m k= 24 height= 15842.59 m k= 25 height= 16803.16 m k= 26 height= 17760.40 m k= 27 height= 18715.93 m k= 28 height= 19676.74 m k= 29 height= 20649.44 m k= 30 Emission heigh between 59.74 m and 145.50 m at k= 2 for z= 100 Layer limits for grid position lat= -23.5803346633911 lon= -44.9668502807617 height= 0.00 m k= 1 height= 59.74 m k= 2 height= 145.50 m k= 3 height= 257.90 m k= 4 height= 397.87 m k= 5 height= 575.59 m k= 6 height= 802.06 m k= 7 height= 1070.66 m k= 8 height= 1532.39 m k= 9 height= 2014.39 m k= 10 height= 2519.01 m k= 11 height= 3049.04 m k= 12 height= 4035.38 m k= 13 height= 5020.68 m k= 14 height= 6005.89 m k= 15 height= 6992.68 m k= 16 height= 7982.44 m k= 17 height= 8976.27 m k= 18 height= 9968.42 m k= 19 height= 10957.52 m k= 20 height= 11941.38 m k= 21 height= 12920.99 m k= 22 height= 13908.15 m k= 23 height= 14879.66 m k= 24 height= 15842.59 m k= 25 height= 16803.16 m k= 26 height= 17760.40 m k= 27 height= 18715.93 m k= 28 height= 19676.74 m k= 29 height= 20649.44 m k= 30 Emission heigh between 802.06 m and 1070.66 m at k= 7 for z= 1000 Layer limits for grid position lat= -23.5196027755737 lon= -44.9668502807617 height= 0.00 m k= 1 height= 59.81 m k= 2 height= 145.61 m k= 3 height= 257.97 m k= 4 height= 397.90 m k= 5 height= 575.53 m k= 6 height= 801.97 m k= 7 height= 1070.70 m k= 8 height= 1532.64 m k= 9 height= 2014.67 m k= 10 height= 2519.25 m k= 11 height= 3049.28 m k= 12 height= 4035.69 m k= 13 height= 5020.84 m k= 14 height= 6005.95 m k= 15 height= 6993.00 m k= 16 height= 7982.73 m k= 17 height= 8976.44 m k= 18 height= 9968.59 m k= 19 height= 10957.95 m k= 20 height= 11942.11 m k= 21 height= 12921.73 m k= 22 height= 13908.66 m k= 23 height= 14880.00 m k= 24 height= 15842.81 m k= 25 height= 16803.23 m k= 26 height= 17760.21 m k= 27 height= 18715.41 m k= 28 height= 19675.99 m k= 29 height= 20648.63 m k= 30 Emission heigh between 575.53 m and 801.97 m at k= 6 for z= 666 Grid information from: D:/temp/Rtmp0sQ5sp/RLIBS_1caf056ed5acb/EmissV/extdata/wrfinput_d01 grid position lat= -22.010806627171 lon= -46.0152584808041 grid position lat= -22.010806627171 lon= -47.9944115841027 grid position lat= -23.4723500487625 lon= -47.0048350324534 Grid information from: vertical.nc Grid output: 4 columns 4 rows 30 levels Grid output: 4 columns 4 rows 30 levels reading EDGAR emissions, output unit is g m-2 s-1 ... from edgar_co_test.nc emi_co x 1.000000 using a example of vehicles (DETRAN 2016 data and SP vahicle distribution): Category Type Fuel Use SP RJ Light Duty Vehicles Gasohol LDV_E25 LDV E25 41 [km/d] 11624342 2712343 Light Duty Vehicles Ethanol LDV_E100 LDV E100 41 [km/d] 874627 204079 Light Duty Vehicles Flex LDV_F LDV FLEX 41 [km/d] 9845022 2297169 Diesel Trucks TRUCKS_B5 TRUCKS B5 110 [km/d] 710634 165814 Diesel Urban Busses CBUS_B5 BUS B5 165 [km/d] 792630 184947 Diesel Intercity Busses MBUS_B5 BUS B5 165 [km/d] 21865 5101 Gasohol Motorcycles MOTO_E25 MOTO E25 140 [km/d] 3227921 753180 Flex Motorcycles MOTO_F MOTO FLEX 140 [km/d] 235056 54846 MG PR SC Light Duty Vehicles Gasohol 4371228 3036828 2029599 Light Duty Vehicles Ethanol 328895 228494 152709 Light Duty Vehicles Flex 3702131 2571986 1718932 Diesel Trucks 267227 185651 124076 Diesel Urban Busses 298061 207072 138392 Diesel Intercity Busses 8222 5712 3817 Gasohol Motorcycles 1213830 843285 563592 Flex Motorcycles 88390 61407 41040 using a example emission factor (values calculated from CETESB 2015): CO PM Light Duty Vehicles Gasohol 1.75 [g/km] 0.0013 [g/km] Light Duty Vehicles Ethanol 10.04 [g/km] 0.0000 [g/km] Light Duty Vehicles Flex 0.39 [g/km] 0.0010 [g/km] Diesel Trucks 0.45 [g/km] 0.0612 [g/km] Diesel Urban Busses 0.77 [g/km] 0.1052 [g/km] Diesel Intercity Busses 1.48 [g/km] 0.1693 [g/km] Gasohol Motorcycles 1.61 [g/km] 0.0000 [g/km] Flex Motorcycles 0.75 [g/km] 0.0000 [g/km] Total of PM : 15071.8124616163 t year-1 FISH not found in emission factor! The emissions factors contains: CO PM using a example of vehicles (DETRAN 2016 data and SP vahicle distribution): Category Type Fuel Use SP RJ Light Duty Vehicles Gasohol LDV_E25 LDV E25 41 [km/d] 11624342 2712343 Light Duty Vehicles Ethanol LDV_E100 LDV E100 41 [km/d] 874627 204079 Light Duty Vehicles Flex LDV_F LDV FLEX 41 [km/d] 9845022 2297169 Diesel Trucks TRUCKS_B5 TRUCKS B5 110 [km/d] 710634 165814 Diesel Urban Busses CBUS_B5 BUS B5 165 [km/d] 792630 184947 Diesel Intercity Busses MBUS_B5 BUS B5 165 [km/d] 21865 5101 Gasohol Motorcycles MOTO_E25 MOTO E25 140 [km/d] 3227921 753180 Flex Motorcycles MOTO_F MOTO FLEX 140 [km/d] 235056 54846 MG PR SC Light Duty Vehicles Gasohol 4371228 3036828 2029599 Light Duty Vehicles Ethanol 328895 228494 152709 Light Duty Vehicles Flex 3702131 2571986 1718932 Diesel Trucks 267227 185651 124076 Diesel Urban Busses 298061 207072 138392 Diesel Intercity Busses 8222 5712 3817 Gasohol Motorcycles 1213830 843285 563592 Flex Motorcycles 88390 61407 41040 vehicles: Category Type Fuel Use SP 1 B5 LDV NA 41 [km/d] 27332097 [ FAIL 1 | WARN 0 | SKIP 0 | PASS 17 ] == Failed tests ================================================================ -- Error (test-emission.R:64:3): emission function works ----------------------- Error in `ud_map_symbols(symbol, ut_unit)`: Unit already maps to "g" Backtrace: x 1. \-EmissV::emission(...) at test-emission.R:64:2 2. \-units::install_unit("MOL", paste(mm, "g")) 3. \-units:::ud_map_symbols(symbol, ut_unit) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 17 ] Error: Test failures Execution halted * checking PDF version of manual ... OK * DONE Status: 1 ERROR