* using log directory 'd:/Rcompile/CRANpkg/local/4.0/AntMAN.Rcheck' * using R version 4.0.5 (2021-03-31) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * checking for file 'AntMAN/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'AntMAN' version '1.1.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'AntMAN' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK ** checking loading without being on the library search path ... OK ** checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [10s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compiled code ... OK * checking examples ... ** running examples for arch 'i386' ... [17s] OK ** running examples for arch 'x64' ... [18s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... ** running tests for arch 'i386' ... [258s] OK Running 'UnitTest_AM_binder.R' [4s] Running 'UnitTest_AM_coclustering.R' [6s] Running 'UnitTest_AM_demo.R' [8s] Running 'UnitTest_AM_extract.R' [12s] Running 'UnitTest_AM_mcmc.R' [9s] Running 'UnitTest_AM_mix_components_prior.R' [2s] Running 'UnitTest_AM_mix_hyperparams.R' [2s] Running 'UnitTest_AM_mix_weights_prior.R' [2s] Running 'UnitTest_AM_plot.R' [104s] Running 'UnitTest_AM_prior.R' [2s] Running 'UnitTest_AM_sample.R' [2s] Running 'UnitTest_AntMANDatasets.R' [2s] Running 'UnitTest_AntMANPackage.R' [2s] Running 'UnitTest_INTERNAL_functions_antman_uninorm.R' [2s] Running 'UnitTest_INTERNAL_utilities.R' [2s] Running 'UseCaseCarcinoma.R' [0s] Running 'UseCaseGalaxy.R' [0s] Running 'UseCaseSegmentation.R' [0s] Running 'UseCaseWordCount.R' [7s] Running 'UserCaseIris.R' [20s] Running 'template.R' [2s] Running 'testBasicMultiBer.R' [17s] Running 'testBasicMultiNorm.R' [0s] Running 'testBasicUniNormNegBin.R' [18s] Running 'testBasicUniNormPois.R' [8s] Running 'testBasicUniPoisDirac.R' [9s] Running 'testBasicUniPoisGamma.R' [10s] ** running tests for arch 'x64' ... [256s] OK Running 'UnitTest_AM_binder.R' [4s] Running 'UnitTest_AM_coclustering.R' [6s] Running 'UnitTest_AM_demo.R' [8s] Running 'UnitTest_AM_extract.R' [13s] Running 'UnitTest_AM_mcmc.R' [10s] Running 'UnitTest_AM_mix_components_prior.R' [2s] Running 'UnitTest_AM_mix_hyperparams.R' [2s] Running 'UnitTest_AM_mix_weights_prior.R' [2s] Running 'UnitTest_AM_plot.R' [105s] Running 'UnitTest_AM_prior.R' [2s] Running 'UnitTest_AM_sample.R' [2s] Running 'UnitTest_AntMANDatasets.R' [2s] Running 'UnitTest_AntMANPackage.R' [2s] Running 'UnitTest_INTERNAL_functions_antman_uninorm.R' [2s] Running 'UnitTest_INTERNAL_utilities.R' [2s] Running 'UseCaseCarcinoma.R' [0s] Running 'UseCaseGalaxy.R' [0s] Running 'UseCaseSegmentation.R' [0s] Running 'UseCaseWordCount.R' [7s] Running 'UserCaseIris.R' [16s] Running 'template.R' [2s] Running 'testBasicMultiBer.R' [16s] Running 'testBasicMultiNorm.R' [0s] Running 'testBasicUniNormNegBin.R' [15s] Running 'testBasicUniNormPois.R' [9s] Running 'testBasicUniPoisDirac.R' [10s] Running 'testBasicUniPoisGamma.R' [10s] * checking PDF version of manual ... OK * DONE Status: OK